Rv0407 - c.412_414delCTAinsTTG


Drug resistance types
1 Sensitive 1 RR-TB 17 HR-TB 4 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 53 Other
lineage Counts
lineage Count
lineage4.9 12
lineage2.1;lineage4.9;lineage6.3 6
10
lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 10
lineage4.6.1.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage1.1.3.1 1
lineage2.1;lineage6.3 1
La3 1
lineage2.2.1 5
lineage2.1 3
lineage4.1.2.1 3
lineage6.1.3 1
La3;lineage2 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.4.1.1 1
lineage3.1 1
lineage4.6.2.2 1
lineage4.1.2 1
La1.2.BCG;La1.8.1 1
lineage4.8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage4.9 1
lineage3 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675221 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4816999 Other None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1184294 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR4819422 HR-TB lineage4.9 None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6789626 Other None
SRR3675248 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675236 Other None
SRR7535086 Other None
ERR702406 Other lineage2.1 None
SRR1173400 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1184346 HR-TB lineage3.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR28119752 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4818929 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4800341 Other lineage3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None