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SRA data
Rv0407
- c.412_414delCTAinsTTG
Drug resistance types
1 Sensitive
1 RR-TB
15 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
12
10
lineage2.1;lineage4.9
10
lineage2.1;lineage4.9;lineage6.3
5
lineage2.2.1
5
lineage2.1
3
lineage4.1.2.1
3
lineage3
2
lineage4.9;lineage6.3
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
75
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR323043
Other
lineage2.1;lineage4.9
None
ERR3283019
Other
lineage2.1;lineage4.9
None
ERR3283027
Other
lineage2.1;lineage4.9;lineage6.3
None
ERR3283036
Other
lineage2.1;lineage4.9
None
ERR3797028
HR-TB
M.canetti;lineage4.9
None
ERR3804169
HR-TB
lineage4.1.3
None
ERR4407463
HR-TB
None
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