Rv0676c - c.1776C>T
Drug resistance types
1 Sensitive
0 RR-TB
6 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 7 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| 3 | |
| lineage3.1.1 | 1 |
| lineage4.9 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4 | 1 |
| lineage4.7 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814352 | Other | lineage2.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816999 | Other | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5451697 | Other | lineage4.5 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR1169194 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR2027263 | Other | lineage4 | None | ERR4819932 | Sensitive | lineage4.7 | None | SRR1165699 | Other | lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR9117709 | Other | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184346 | HR-TB | lineage3.1 | None |
|---|
