lineage | Count |
---|---|
lineage4.1.3 | 2 |
lineage4.6.2.2;lineage4.2.2 | 1 |
63 | |
lineage4.2.2 | 147 |
lineage2 | 2 |
lineage4.4.2;lineage4.2.2 | 1 |
lineage4.1.2.1 | 3 |
lineage1.1.2 | 1 |
lineage6.3.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4 | 4 |
lineage4.3.3 | 3 |
lineage4.2 | 22 |
lineage3.1 | 2 |
lineage1.1.1 | 1 |
lineage3 | 3 |
lineage4.5 | 1 |
lineage2.2.1 | 3 |
lineage2.2 | 1 |
lineage4.2.2;lineage1.1.1 | 1 |
lineage4.2.2;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 264 |
ID | Drug resistance | Lineage | Country iso2 | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR369620 | HR-TB | lineage4.6.2.2;lineage4.2.2 | None | ERR3797069 | Other | None | ERR4178246 | Sensitive | lineage4.2.2 | None | ERR4811083 | Sensitive | lineage4.2.2 | cn | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810501 | Sensitive | lineage4.4.2;lineage4.2.2 | cn | ERR4810629 | Sensitive | lineage4.2.2 | cn | ERR4811022 | HR-TB | None | ERR4811032 | Sensitive | lineage4.2.2 | cn | ERR4810611 | Other | lineage4.2.2 | cn | ERR4810725 | Sensitive | lineage4.2.2 | cn | ERR4810741 | HR-TB | None | ERR4811161 | Pre-XDR-TB | lineage4.2.2 | cn | ERR4811105 | HR-TB | None | ERR4811362 | Pre-XDR-TB | lineage4.2.2 | cn | ERR4811142 | MDR-TB | None | ERR4811165 | Sensitive | lineage4.2.2 | cn | ERR4811223 | Sensitive | lineage4.2.2 | None | ERR4811340 | Sensitive | lineage4.2.2 | cn | ERR4811206 | Sensitive | lineage4.2.2 | cn | ERR4811375 | Sensitive | lineage4.2.2 | None | ERR736874 | HR-TB | None | ERR702406 | HR-TB | None | ERR4812545 | Sensitive | lineage4.1.2.1 | None | ERR5336148 | Other | None | ERR6865863 | Sensitive | lineage4.2.2 | None | ERR718281 | HR-TB | lineage4.2.2 | th | ERR7339143 | Sensitive | lineage4.2.2 | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR751764 | Sensitive | lineage4.2.2 | th | ERR752060 | Sensitive | lineage4.2.2 | th | ERR751645 | Sensitive | lineage4.2.2 | th | ERR7911325 | MDR-TB | lineage4.2.2 | vn | ERR9786604 | Other | None | ERR9119246 | Sensitive | lineage4.2.2 | None | ERR9119323 | Sensitive | lineage4.2.2 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR10305986 | Other | lineage4.2.2 | None | ERR9787197 | Other | None | SRR10305629 | Sensitive | lineage4.2.2 | None | SRR10305751 | Sensitive | lineage4.2.2 | None | SRR10305787 | HR-TB | lineage4.2.2 | None | SRR1169194 | Other | None | SRR10305985 | Sensitive | lineage4.2.2 | None | SRR1172234 | Other | None | SRR1172951 | Other | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173118 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1175074 | MDR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1184294 | HR-TB | None | ERR11050450 | Sensitive | lineage4.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12199469 | Sensitive | lineage1.1.1 | None | SRR12142341 | HR-TB | None | SRR13423567 | Pre-XDR-TB | lineage4.2 | None | SRR13423561 | MDR-TB | lineage4.2 | None | SRR12416824 | HR-TB | None | SRR15316421 | MDR-TB | lineage4.2.2 | None | SRR14519742 | HR-TB | lineage4.2.2 | None | SRR15315814 | Sensitive | lineage4.2.2 | None | SRR15316386 | Sensitive | lineage4.2.2 | None | SRR15316575 | Sensitive | lineage4.2.2 | None | SRR15368780 | Sensitive | lineage4.2.2 | None | SRR15368808 | Sensitive | lineage4.2.2 | None | SRR15369049 | Sensitive | lineage4.2.2 | None | SRR15368973 | Other | None | SRR18213864 | Other | lineage3 | None | SRR15723231 | HR-TB | lineage4.2.2 | None | SRR15723050 | Sensitive | lineage4.2.2 | None | SRR16370547 | MDR-TB | lineage4.2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18511604 | Sensitive | lineage4.2.2 | None | SRR18549037 | Sensitive | lineage4.2.2 | None | SRR20969397 | Sensitive | lineage4.2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969414 | MDR-TB | lineage4.2.2 | None | SRR20969745 | Pre-XDR-TB | lineage4.2.2 | None | SRR21277773 | Other | lineage4.2.2 | None | SRR2100641 | Other | lineage3 | None | SRR21276976 | Sensitive | lineage4.2.2 | None | SRR21277076 | Sensitive | lineage4.2.2 | None | SRR21277239 | Sensitive | lineage4.2.2 | None | SRR21277458 | Sensitive | lineage4.2.2 | None | SRR21277547 | Sensitive | lineage4.2.2 | None | SRR21277032 | Sensitive | lineage4.2.2 | None | SRR21576546 | RR-TB | lineage4.2.2 | None | SRR21291116 | Sensitive | lineage4.2.2 | None | SRR21031726 | Sensitive | lineage4.2.2 | None | SRR21663286 | HR-TB | lineage4.2.2 | None | SRR21662821 | Sensitive | lineage4.2 | None | ERR11081775 | Sensitive | lineage4.2.2 | None | SAMN03246713 | RR-TB | lineage4.2.2 | cn | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR21887703 | MDR-TB | lineage4.2.2 | None | SRR3675465 | HR-TB | None | ERR2179576 | Sensitive | lineage4.2.2 | cn | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4815971 | Sensitive | lineage4.2 | None | ERR2446258 | Sensitive | lineage4.2.2 | nl | SRR3675311 | Other | None | ERR4816043 | Other | lineage4.2 | None | SRR3675572 | Other | None | ERR4816318 | Other | lineage4.2.2 | gb | SRR2024914 | Pre-XDR-TB | lineage4.2.2 | cn | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR2179665 | RR-TB | lineage4.2.2 | cn | ERR3275774 | MDR-TB | lineage4.2.2 | nl | ERR4816585 | Other | lineage2.2 | None | ERR4817485 | Sensitive | lineage4.2.2 | gb | ERR3275545 | Sensitive | lineage4.2.2 | nl | ERR4817275 | Other | lineage4.2.2 | None | SRR5065335 | Sensitive | lineage4.2 | vn | SRR5065399 | Sensitive | lineage4.2 | vn | SRR5073556 | HR-TB | lineage4.2.2 | vn | ERR4817796 | Sensitive | lineage4.2.2 | None | SRR5073516 | HR-TB | lineage4.2.2 | vn | ERR4817921 | Sensitive | lineage4.2.2 | gb | SRR5065571 | Sensitive | lineage4.2.2 | vn | ERR228289 | Other | lineage3 | None | SRR5065578 | HR-TB | lineage4.2 | vn | ERR4818296 | Other | lineage4.2.2 | None | ERR234659 | HR-TB | None | SRR5065690 | Sensitive | lineage4.2 | vn | SRR5067263 | Sensitive | lineage4.2.2 | vn | SRR5067274 | HR-TB | lineage4.2.2 | vn | SRR5067281 | HR-TB | lineage4.2 | vn | SRR1724000 | Sensitive | lineage4.2.2 | cn | SRR5067355 | Sensitive | lineage4.2.2 | vn | SRR5067382 | HR-TB | lineage4.2 | vn | SRR5067589 | Sensitive | lineage4.2.2 | vn | SRR5067398 | Sensitive | lineage4.2.2 | vn | SRR5073960 | Sensitive | lineage4.2 | vn | SRR5067459 | HR-TB | lineage4.2 | None | SRR5067473 | HR-TB | lineage4.2.2 | vn | ERR2179674 | MDR-TB | lineage4.2.2 | cn | SRR5067577 | Sensitive | lineage4.2.2 | vn | SRR5065225 | Sensitive | lineage4.2.2 | vn | SRR5067435 | MDR-TB | lineage4.2 | vn | SRR5073733 | Sensitive | lineage4.2 | vn | SRR5073978 | Sensitive | lineage4.2.2 | vn | SRR5073770 | Sensitive | lineage4.2.2 | vn | SRR5065230 | HR-TB | lineage4.2.2 | vn | SRR5067604 | Sensitive | lineage4.2.2 | vn | SRR5073805 | Sensitive | lineage4.2 | vn | ERR4819147 | Sensitive | lineage4.2.2 | None | SRR5065276 | HR-TB | lineage4.2 | vn | SRR5067621 | Sensitive | lineage4.2 | vn | SRR5073817 | HR-TB | lineage4.2.2 | vn | SRR1724001 | Sensitive | lineage4.2.2 | cn | ERR2179604 | Sensitive | lineage4.2.2 | cn | ERR4819280 | Sensitive | lineage4 | None | ERR4819576 | Other | lineage4.2.2 | gb | ERR4819837 | Sensitive | lineage4.2 | None | ERR2517222 | Sensitive | lineage4.2.2 | nl | ERR4819781 | Other | lineage2.2.1 | None | ERR4819875 | Sensitive | lineage4.2.2 | gb | SRR5341302 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5341333 | HR-TB | None | SRR1724004 | MDR-TB | lineage4.2.2 | cn | ERR2179798 | Sensitive | lineage4.2.2 | cn | SRR6045503 | HR-TB | None | ERR4820129 | Other | lineage4.2 | gb | ERR2179742 | Sensitive | lineage4.2.2 | cn | ERR2179684 | Sensitive | lineage4.2.2 | cn | ERR2179723 | Sensitive | lineage4.2.2 | cn | ERR4822221 | Sensitive | lineage4.2.2 | None | ERR4821431 | Sensitive | lineage4.2 | None | SRR6045327 | HR-TB | None | SRR5709781 | MDR-TB | lineage4.2.2 | th | SRR6044790 | HR-TB | None | SRR6046066 | HR-TB | None | ERR2843470 | Sensitive | lineage4.2.2 | None | ERR2843471 | Sensitive | lineage4.2.2 | None | ERR4828576 | Sensitive | lineage4.2.2 | None | ERR4828347 | Sensitive | lineage4.2.2 | vn | ERR4828371 | RR-TB | lineage4.2.2 | vn | ERR4828554 | Sensitive | lineage4.2.2 | vn | ERR4828757 | Sensitive | lineage4.2.2 | vn | ERR4828595 | Sensitive | lineage4.2.2 | vn | ERR4830320 | Sensitive | lineage4.2.2 | vn | ERR4830266 | Sensitive | lineage4.2.2 | vn | ERR4830354 | HR-TB | lineage4.2.2;lineage1.1.1 | vn | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6480581 | Sensitive | lineage4.2.2 | None | SRR6397411 | Sensitive | lineage4.2.2 | ca | SRR6398049 | HR-TB | lineage4.2.2 | ca | SRR6398058 | Sensitive | lineage4.2.2;lineage2.2.1 | ca | ERR4831619 | Pre-XDR-TB | lineage4.2.2 | vn | ERR2179799 | Sensitive | lineage4.2.2 | cn | ERR3275880 | Other | lineage4.2.2 | nl | ERR2179601 | Sensitive | lineage4.2.2 | cn | SRR6824338 | RR-TB | lineage4.2.2 | cn | SRR6789626 | Other | None | SRR671782 | Sensitive | lineage4.2.2 | cn | SRR6824397 | Sensitive | lineage4.2.2 | cn | SRR6824359 | MDR-TB | lineage4.2.2 | cn | ERR2179807 | MDR-TB | lineage4.2.2 | cn | SRR2024937 | MDR-TB | lineage4.2.2 | cn | ERR4831848 | HR-TB | lineage4.2.2 | vn | DRR184630 | HR-TB | lineage4.2.2 | vn | SRR8217885 | Sensitive | lineage4.2.2 | None | SRR8217896 | Sensitive | lineage4.2.2 | None | SRR1723999 | Sensitive | lineage4.2.2 | cn | ERR323043 | HR-TB | None | DRR029666 | Sensitive | lineage4 | None | ERR502950 | MDR-TB | lineage4.2.2 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | DRR184679 | Sensitive | lineage4.2.2 | vn | DRR184658 | HR-TB | lineage4.2.2 | vn | DRR184661 | HR-TB | lineage4.2.2 | vn | DRR184881 | Sensitive | lineage4.2.2 | vn | DRR184925 | Sensitive | lineage4.2.2 | vn | DRR184910 | Sensitive | lineage4.2.2 | vn | DRR184927 | Sensitive | lineage4.2.2 | vn | DRR184933 | Sensitive | lineage4.2.2 | vn | DRR184973 | Sensitive | lineage4.2.2 | vn | DRR184936 | Sensitive | lineage4.2.2 | vn | DRR184950 | Sensitive | lineage4.2.2 | vn | DRR184995 | Sensitive | lineage4.2.2 | vn | DRR185012 | HR-TB | lineage4.2.2 | vn | DRR184975 | Sensitive | lineage4.2.2 | vn | DRR185006 | Sensitive | lineage4.2.2 | vn | DRR185002 | Sensitive | lineage4.2.2 | vn | ERR1034652 | Other | None | DRR185051 | Sensitive | lineage4.2.2 | vn | DRR185052 | Sensitive | lineage4.2.2 | vn | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None |
---|