Rv1854c - c.1278C>G
Drug resistance types
0 Sensitive
2 RR-TB
54 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| 73 | |
| lineage2.2.1 | 5 |
| lineage4.1.2.1 | 3 |
| lineage4.9 | 7 |
| lineage4.1.3 | 2 |
| lineage4 | 6 |
| La1 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3.1 | 2 |
| lineage2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2 | 1 |
| lineage4.8 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502532 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR502889 | Other | None | ERR067681 | HR-TB | None | ERR323043 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7535086 | Other | None | SRR7585435 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR736867 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR9786671 | Other | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1172728 | MDR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | ERR158583 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675221 | HR-TB | None | SRR3742665 | HR-TB | None | ERR176643 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675574 | HR-TB | None | ERR212033 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR234659 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818394 | Other | lineage4.9 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5007188 | Other | lineage4 | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | SRR6046225 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045053 | Other | None | SRR6045327 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | SRR6789626 | Other | None | SRR6046824 | HR-TB | None |
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