Rv0006 - c.2007C>T
Drug resistance types
16 Sensitive
0 RR-TB
25 HR-TB
9 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage5.1.4 | 1 |
| lineage2.2.1 | 13 |
| 29 | |
| lineage3 | 3 |
| lineage4 | 9 |
| lineage4.9 | 12 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| lineage3.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1 | 1 |
| lineage2.2.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513283 | Other | lineage5.1.4 | None | SRR6153194 | Sensitive | lineage2.2.1 | ca | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341396 | Other | lineage4 | None | ERR7911478 | MDR-TB | lineage2.2.1 | vn | ERR4819781 | Other | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR7496509 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046540 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4818651 | Sensitive | lineage3 | gb | SRR7535086 | Other | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR3283010 | Other | La1 | None | ERR3445504 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3797069 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR400345 | Other | lineage4 | None | ERR5336148 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR400320 | Sensitive | lineage4 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | ERR4828181 | HR-TB | lineage2.2.1 | vn | ERR4830327 | MDR-TB | lineage2.2.1 | vn | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR6359045 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736867 | HR-TB | None | ERR7737862 | MDR-TB | lineage2.2.1 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119228 | MDR-TB | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR14782405 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR19303884 | HR-TB | None | SRR21709865 | Sensitive | lineage2.2 | None | SRR21676313 | HR-TB | lineage2.2.2 | None | SRR3675465 | HR-TB | None | SRR26937016 | MDR-TB | lineage2.2.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR26937082 | MDR-TB | lineage2.2.1 | None | SRR26399433 | MDR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675229 | Other | lineage4 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR6824584 | Pre-XDR-TB | lineage2.2.2 | cn | SRR3675221 | HR-TB | None | SRR3675572 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675311 | Other | None | SRR3675522 | Other | None | ERR4816999 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675236 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4816585 | Other | lineage2.2 | None |
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