Rv0006 - c.2007C>T
Drug resistance types
7 Sensitive
0 RR-TB
9 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 7 |
| lineage2.2.2 | 3 |
| lineage4.9 | 16 |
| lineage4.6.1.1 | 1 |
| 6 | |
| lineage6.3.1 | 1 |
| lineage2.2.1 | 15 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage3.1.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.8 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR29093119 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675275 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR18213713 | HR-TB | None | ERR9787139 | Other | lineage6.3.1 | None | SRR6153194 | Sensitive | lineage2.2.1 | ca | SRR26399433 | MDR-TB | lineage2.2.1 | None | SRR3675214 | Other | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4828181 | HR-TB | lineage2.2.1 | vn | SRR7496472 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR26399405 | HR-TB | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4818651 | Sensitive | lineage3 | gb | SRR3675522 | Other | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29050838 | HR-TB | lineage2.2.1 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937016 | MDR-TB | lineage2.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR6824584 | Pre-XDR-TB | lineage2.2.2 | cn | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4812155 | Other | lineage4.9 | None | ERR9117709 | Other | None | SRR3675549 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR9119228 | MDR-TB | lineage2.2.1 | None | SRR26937082 | MDR-TB | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR21709865 | Sensitive | lineage2.2.2 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4815604 | Other | None | ERR736856 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR7737862 | MDR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4830327 | MDR-TB | lineage2.2.1 | vn | ERR4820854 | Other | lineage4.1.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR7911478 | MDR-TB | lineage2.2.1 | vn | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR7496509 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None |
|---|
