Rv0006 - c.2007C>T
Drug resistance types
8 Sensitive
0 RR-TB
11 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.8 | 1 |
| lineage4.9 | 16 |
| lineage3 | 3 |
| lineage2.2.1 | 15 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.2 | 6 |
| 6 | |
| lineage2.1;lineage4.9 | 7 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4799025 | Other | lineage4.8 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR4797588 | MDR-TB | lineage3 | None |
| ERR4830327 | MDR-TB | lineage2.2.1 | vn |
| ERR11465015 | Sensitive | lineage4.3.4.2.1 | None |
| SRR29053077 | HR-TB | lineage2.2.2 | None |
| SRR3675387 | Other | lineage4.9 | None |
| ERR9117709 | Other | None | |
| SRR7496509 | Other | None | |
| ERR736867 | Other | lineage2.1;lineage4.9 | None |
| ERR13291900 | Sensitive | lineage2.2.2 | None |
| ERR4828181 | HR-TB | lineage2.2.1 | vn |
| SRR7496472 | Other | lineage4.9 | None |
| ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
| SRR6153194 | Sensitive | lineage2.2.1 | ca |
| ERR4814352 | Other | lineage2.2.1 | None |
| SRR6045380 | Other | lineage2.1;lineage4.9 | None |
| SRR3675465 | Other | lineage4.9;lineage6.3 | None |
| SRR6045242 | Other | lineage2.1;lineage4.9 | None |
| SRR26399405 | HR-TB | lineage2.2.1 | None |
| SRR29093119 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4818021 | Other | La1.2.BCG;La1.8.1 | None |
| ERR4818651 | Sensitive | lineage3 | gb |
| SRR6046540 | Other | lineage2.1;lineage4.9 | None |
| SRR3675275 | Other | lineage4.9 | None |
| SRR3675214 | Other | lineage4.9 | None |
| ERR3797069 | Other | lineage4.9 | None |
| SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR26937016 | MDR-TB | lineage2.2.1 | None |
| ERR4816585 | Other | lineage2.2 | None |
| SRR29050838 | HR-TB | lineage2.2.1 | None |
| ERR7737862 | MDR-TB | lineage2.2.1 | None |
| SRR6824584 | Pre-XDR-TB | lineage2.2.2 | cn |
| ERR4820854 | Other | lineage4.1.2.1 | None |
| ERR9117805 | Other | lineage4.3.2 | None |
| SRR21676313 | HR-TB | lineage2.2.2 | None |
| ERR4812155 | Other | lineage4.9 | None |
| ERR9786611 | HR-TB | lineage4.1.3 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| ERR4816559 | MDR-TB | lineage4.4.1.1 | None |
| SRR26937082 | MDR-TB | lineage2.2.1 | None |
| ERR6359082 | Other | lineage4.9 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| ERR3797070 | Other | lineage4.9 | None |
| SRR5341412 | Pre-XDR-TB | lineage3 | None |
| SRR3675221 | Other | lineage4.9 | None |
| ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
| ERR7911478 | MDR-TB | lineage2.2.1 | vn |
| ERR3283036 | Other | lineage2.1;lineage4.9 | None |
| ERR3283019 | Other | lineage2.1;lineage4.9 | None |
| ERR9787139 | Other | lineage6.3.1 | None |
| ERR4817896 | HR-TB | lineage2.2.1 | None |
| SRR19303884 | Other | lineage2.1;lineage6.3 | None |
| SRR3675522 | Other | lineage4.9 | None |
| ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None |
| SRR5341345 | Sensitive | lineage4.9 | None |
| ERR4815604 | Other | None | |
| SRR6046066 | Other | lineage4.9 | None |
| SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
| ERR4816999 | Other | None | |
| SRR3675236 | Other | None | |
| SRR3675524 | Other | lineage4.9;lineage6.3 | None |
| ERR3804169 | HR-TB | lineage4.1.3 | None |
| SRR3675549 | Other | lineage4.9 | None |
| SRR3675581 | Other | lineage2.1;lineage4.9 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR9119228 | MDR-TB | lineage2.2.1 | None |
| ERR4819781 | Other | lineage2.2.1 | None |
| SRR21709865 | Sensitive | lineage2.2.2 | None |
| SRR28351455 | Other | lineage3.1.2.1;lineage4 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| SRR18213713 | HR-TB | None | |
| SRR26399433 | MDR-TB | lineage2.2.1 | None |
