Rv0006 - c.2007C>T


Drug resistance types
7 Sensitive 0 RR-TB 9 HR-TB 10 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 44 Other
lineage Counts
lineage Count
lineage2.2.2 3
lineage4.9;lineage6.3 2
lineage3.1.2.1;lineage4 1
lineage2.2.1 15
lineage4.9;lineage6.1.3 1
La1.2.BCG;La1.8.1 1
lineage4.9 16
lineage6.3.1 1
lineage3.1.2 1
lineage4.8 1
lineage4.1;lineage4.9 1
6
lineage4.3.2 1
lineage4.1.3 2
lineage2.1;lineage4.9 7
lineage2.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
lineage2.1;lineage4.9;lineage6.3 4
lineage4.3.4.2.1 1
lineage4.4.1.1 1
lineage3 3
lineage2.1;lineage6.3 2
lineage4.1.2.1 2
spoligotype Counts
spoligotype Count
None 75
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21709865 Sensitive lineage2.2.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR26399405 HR-TB lineage2.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675275 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR3797069 Other lineage4.9 None
SRR29050838 HR-TB lineage2.2.1 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4799025 Other lineage4.8 None
SRR5341345 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4816999 Other None
SRR6824584 Pre-XDR-TB lineage2.2.2 cn
ERR4830327 MDR-TB lineage2.2.1 vn
ERR9117805 Other lineage4.3.2 None
ERR3804169 HR-TB lineage4.1.3 None
SRR3675387 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR4828181 HR-TB lineage2.2.1 vn
ERR9119228 MDR-TB lineage2.2.1 None
SRR26937082 MDR-TB lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR29093119 Pre-XDR-TB lineage2.2.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4815604 Other None
SRR14782054 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR7496472 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR3675221 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818651 Sensitive lineage3 gb
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
SRR6153194 Sensitive lineage2.2.1 ca
SRR26399433 MDR-TB lineage2.2.1 None
SRR3675214 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR26937016 MDR-TB lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR7737862 MDR-TB lineage2.2.1 None
ERR4797588 MDR-TB lineage3 None
ERR4820854 Other lineage4.1.2.1 None
ERR4812155 Other lineage4.9 None
ERR7911478 MDR-TB lineage2.2.1 vn
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None