Rv1644 - c.-183C>T
Drug resistance types
2 Sensitive
0 RR-TB
11 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| 7 | |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4 | 2 |
| La1.8.1 | 1 |
| lineage2.1;lineage4.9 | 9 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.9 | 10 |
| lineage4.1.2.1 | 3 |
| La3;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.8.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816999 | Other | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3283044 | Other | lineage4 | None | ERR3283010 | Sensitive | La1.8.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675214 | Other | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR6046066 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212123 | Other | lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR161037 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675236 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9787197 | Other | None | ERR4815752 | Other | lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4819932 | Other | lineage4.7 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9117709 | Other | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675549 | Other | lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
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