TB-Profiler
Home
Upload
SRA data
Rv0001
- c.1461C>G
Drug resistance types
4 Sensitive
4 RR-TB
35 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
28
17
lineage2.1;lineage4.9
13
lineage2.2.1
9
lineage2.1;lineage4.9;lineage6.3
8
La3;lineage4.9
4
lineage2.1
3
lineage4.2;lineage4.9
3
La3;lineage2.1;lineage4.9;lineage6.3
3
lineage4.9;lineage6.3
3
Showing 1 to 10 of 39 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
130
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035157
Other
lineage4.9
None
ERR13291860
Sensitive
lineage2.2.1
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
ERR176751
Other
lineage4.9
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR2027263
Other
lineage4
None
ERR2229542
Other
lineage4.8
None
ERR234659
Other
None
Showing 1 to 10 of 130 entries
Previous
1
2
3
4
5
…
13
Next