Rv1819c - c.-175G>A
Drug resistance types
1 Sensitive
2 RR-TB
14 HR-TB
2 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 5 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;lineage4.8 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.7 | 1 |
| lineage3 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.6.1.1 | 1 |
| lineage2.1 | 2 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.2.1 | 3 |
| La3;lineage2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| 3 | |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.1.3 | 2 |
| lineage4.2;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119805 | Other | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | SRR25827682 | Other | None | ERR4800341 | HR-TB | lineage3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4799629 | Sensitive | lineage3 | in | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None |
|---|
