lineage | Count |
---|---|
103 | |
lineage4.9 | 5 |
La1 | 1 |
lineage4 | 2 |
lineage2 | 2 |
lineage4.6.1.1 | 1 |
lineage1.1.2 | 1 |
lineage3.1 | 1 |
lineage4.3.3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.5 | 1 |
lineage2.2.1;La3 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.1 | 1 |
lineage2.2.1 | 2 |
lineage4.8 | 1 |
lineage2.2 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 127 |
ID | Drug resistance | Lineage | Country iso2 | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | SRR6046066 | HR-TB | None | ERR2693257 | Other | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046492 | Other | None | ERR4830353 | Other | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6789626 | Other | None | ERR502889 | Other | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323043 | HR-TB | None | ERR067681 | HR-TB | None | ERR3439432 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797017 | Other | None | ERR4811022 | HR-TB | None | ERR3797069 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810741 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR702404 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | SRR1169194 | Other | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR3675465 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675486 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675222 | Other | None | SRR3675221 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675502 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675234 | Other | None | SRR3675501 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675572 | Other | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341418 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None |
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