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SRA data
Rv3696c
- c.561G>T
Drug resistance types
5 Sensitive
3 RR-TB
14 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
12
12
lineage2.1;lineage4.9
8
lineage4.9;lineage6.3
5
lineage3
4
lineage2.1
4
lineage2.2.1
3
lineage2.1;lineage4.9;lineage6.3
3
La3
2
lineage2.2.1.1
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
93
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR046808
Sensitive
lineage3
None
ERR046828
Sensitive
lineage3
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035157
Other
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR176549
Other
lineage4.3.4.2.1
None
ERR176793
Other
lineage4.1.1.1
None
ERR2027263
Other
lineage4
None
ERR234659
Other
None
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