Rv0005 - c.610C>T
Drug resistance types
0 Sensitive
1 RR-TB
13 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| 9 | |
| lineage3.1.1 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9 | 9 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1 | 2 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.7 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4816585 | Other | lineage2.2 | None |
| SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4816999 | Other | None | |
| SRR1196474 | Other | lineage3.1.1 | None |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
| ERR4820854 | Other | lineage4.1.2.1 | None |
| ERR176793 | Other | lineage4.1.1.1 | None |
| SRR1165699 | Other | lineage4.9 | None |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR702406 | Other | lineage2.1 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| ERR736867 | Other | lineage2.1;lineage4.9 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| SRR1184294 | Other | lineage4.9 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR3675221 | Other | lineage4.9 | None |
| SRR1184372 | MDR-TB | None | |
| SRR1165667 | Other | lineage4.9;lineage6.3 | None |
| SRR5341333 | Other | lineage2.1;lineage4.9 | None |
| SRR1173778 | Other | lineage4.9 | None |
| SRR1196768 | MDR-TB | None | |
| SRR1196583 | Other | lineage4.9 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR18213713 | HR-TB | None | |
| ERR4817893 | Other | La3;lineage4.8 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR4819932 | Other | lineage4.7 | None |
| SRR1173355 | Other | lineage4.9 | None |
| SRR1196494 | MDR-TB | None | |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR1035157 | Other | lineage4.9 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| SRR1196546 | Other | lineage4.9 | None |
| SRR1172728 | RR-TB | La3 | None |
| ERR9117709 | Other | None | |
| SRR1173400 | Other | lineage4.9 | None |
| ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
| ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
| ERR323043 | Other | lineage2.1;lineage4.9 | None |
| SRR1184346 | HR-TB | lineage3.1 | None |
| SRR26558642 | HR-TB | lineage2.1 | None |
| SRR1184381 | MDR-TB | None | |
| ERR234659 | Other | None | |
| ERR4814352 | Other | lineage2.2.1 | None |
| ERR4819781 | Other | lineage2.2.1 | None |
| SRR3675572 | Other | None | |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| SRR1173629 | Other | lineage2.1;lineage4.9 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
