Rv1694 - c.42G>C


Drug resistance types
2 Sensitive 3 RR-TB 127 HR-TB 10 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
142
lineage4.9 14
lineage6.3;lineage2.2.1 1
lineage4.1 1
lineage4.1.1 1
lineage2.2.1 9
lineage4.3.4.2.1 1
lineage3;lineage2.1 1
lineage2.1 2
lineage4.3 1
lineage4.8 3
lineage4 5
lineage2.2 5
lineage4.8;La3 1
La1.8.1 1
lineage4;lineage1.1 1
lineage4.1.2.1 5
lineage3 2
lineage4.2.1.1 1
lineage3.1 4
La2 1
lineage2 3
lineage4.3.2 2
lineage3.1.2 1
La3 1
lineage4.3.3 3
lineage2.2.1.1 2
lineage4.5 1
spoligotype Counts
spoligotype Count
None 215
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325445 HR-TB None
SRR26159043 Other lineage4.9 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR158583 HR-TB None
SRR3675486 HR-TB None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3416776 Other lineage2.1 None
ERR181744 HR-TB None
ERR212034 HR-TB None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675383 HR-TB None
ERR4816151 Other lineage4.8 None
SRR3675545 HR-TB None
ERR4817037 Other lineage4.9 None
ERR212001 HR-TB None
SRR3675550 Other None
ERR212033 HR-TB None
ERR176643 HR-TB None
SRR3675311 Other None
ERR4815551 Other lineage2.2.1 None
SRR3675312 HR-TB lineage4 None
ERR176740 HR-TB None
ERR176751 HR-TB None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR212123 Other None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
ERR2446070 Sensitive lineage4.8 None
SRR3675571 HR-TB None
ERR212121 HR-TB None
SRR3675574 HR-TB None
ERR4816656 HR-TB None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR234659 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4818021 Other La1.8.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4818929 HR-TB None
ERR4818615 Other None
ERR4820854 Other lineage4.1.2.1 None
ERR2514692 Other None
SRR5341418 Other None
ERR4819781 Other lineage2.2.1 None
ERR2693239 HR-TB None
SRR5341302 HR-TB None
ERR2514908 Sensitive lineage3 None
SRR5341333 HR-TB None
ERR2693254 Other None
ERR2693230 Other None
SRR6045526 HR-TB None
ERR2693257 Other None
SRR6046133 HR-TB None
ERR278594 HR-TB None
SRR6045555 HR-TB None
SRR6044890 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6045952 HR-TB None
SRR6045327 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045233 HR-TB None
SRR6046362 HR-TB None
SRR6046066 HR-TB None
SRR6046225 HR-TB None
SRR6325442 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046482 HR-TB None
SRR6046397 Other None
SRR6325444 HR-TB None
SRR6046514 HR-TB None
SRR6046540 HR-TB None
SRR6325448 HR-TB None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046824 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6257065 HR-TB lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR294248 HR-TB None
SRR6789626 Other None
ERR294266 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR502524 HR-TB La2 None
ERR323036 HR-TB None
ERR5311099 HR-TB None
ERR502532 HR-TB None
ERR502889 Other None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR7535086 Other None
ERR323038 HR-TB None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR067681 HR-TB None
ERR133986 HR-TB None
ERR1034652 Other None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1035157 Other lineage4.9 None
ERR3283032 HR-TB None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR3797036 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3797082 Other lineage4.9 None
ERR4798406 HR-TB None
ERR4188350 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR403298 HR-TB lineage4 None
ERR4407463 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR4810741 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR702404 HR-TB None
ERR736865 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4800341 Other lineage3 None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR702406 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
SRR1172234 Other None
ERR8976043 HR-TB None
SRR1002700 HR-TB lineage2.2.1 None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1172817 HR-TB None
SRR1172728 MDR-TB None
SRR1172857 MDR-TB None
SRR1173384 Other lineage4 None
SRR1172951 Other None
SRR1173363 HR-TB None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173484 Other lineage4 None
SRR1173400 Other None
SRR1173562 HR-TB lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173778 Other None
SRR1175074 MDR-TB None
SRR1173788 Other None
SRR1180137 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183049 Other lineage2.2 None
SRR1183145 Other lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184294 HR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184388 Other None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196546 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR12142341 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR13861434 RR-TB lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR1640750 HR-TB None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR20969677 HR-TB lineage2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None