Rv3855 - c.-90G>A
Drug resistance types
1 Sensitive
0 RR-TB
6 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| 2 | |
| lineage2.2.1 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage3.1.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 25 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR1184381 | MDR-TB | None | |
| ERR4819781 | Other | lineage2.2.1 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR7535086 | Other | None | |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| SRR1184294 | Other | lineage4.9 | None |
| ERR4814352 | Other | lineage2.2.1 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR29126883 | Sensitive | lineage3.1.2 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR1173400 | Other | lineage4.9 | None |
| ERR323043 | Other | lineage2.1;lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| SRR8651654 | Pre-XDR-TB | lineage2.2.1 | cn |
| SRR5341333 | Other | lineage2.1;lineage4.9 | None |
