Rv0676c - c.2442C>G
Drug resistance types
7 Sensitive
1 RR-TB
36 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 22 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 7 |
| La1.7;lineage4.9 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 8 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| 4 | |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341373 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR28119753 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675236 | Other | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR9117709 | Other | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046485 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3283040 | HR-TB | lineage4.9 | None |
|---|
