lineage | Count |
---|---|
lineage4.9;lineage6.3 | 8 |
lineage4.9 | 22 |
M.canetti;lineage2.1 | 1 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
La1.7;lineage4.9 | 3 |
4 | |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
lineage2.2.1 | 1 |
lineage4.3.2;lineage4.9 | 1 |
La1.7;M.canetti;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
M.canetti;lineage2.1;lineage4.9 | 1 |
La3;lineage4.9 | 7 |
lineage2.2.1;lineage6.3 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
La3;M.canetti;lineage2.1;lineage4.9 | 2 |
La3;lineage2.1;lineage6.3 | 1 |
lineage2.2 | 3 |
lineage2.1;lineage4.9;lineage6.3 | 2 |
La1.7;lineage4.9;lineage7 | 3 |
La2;lineage4.9 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 2 |
La1.7;lineage3;lineage4.9;lineage7 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 75 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR3675524 | Other | lineage4.9;lineage6.3 | None |
ERR1034634 | HR-TB | lineage4.9 | None |
SRR6046485 | Other | lineage4.9 | None |
ERR323041 | HR-TB | M.canetti;lineage2.1 | None |
SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
ERR987722 | MDR-TB | None | |
SRR28119805 | Other | lineage4.9 | None |
ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
ERR4819781 | Other | lineage2.2.1 | None |
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
SRR1165667 | Other | lineage4.9;lineage6.3 | None |
SRR5341373 | Other | lineage4.9 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
ERR9119669 | HR-TB | lineage4.9 | None |
ERR3283014 | Sensitive | La3;lineage4.9 | None |
SRR6046133 | HR-TB | lineage4.9 | None |
SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
SRR6045219 | HR-TB | lineage4.9 | None |
ERR3283047 | Sensitive | La3;lineage4.9 | None |
SRR28119753 | Other | lineage4.9 | None |
ERR3283011 | Other | La3;lineage4.9 | None |
SRR3675236 | Other | None | |
ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
ERR3797064 | Other | La3;lineage4.9 | None |
ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
SRR1183111 | HR-TB | lineage4.9 | None |
ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
ERR3283018 | HR-TB | lineage4.9 | None |
ERR234659 | Other | None | |
ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None |
SRR6045555 | Other | lineage4.9 | None |
SRR1173778 | Other | lineage4.9 | None |
SRR1196583 | Other | lineage4.9 | None |
ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
SRR28119717 | Other | lineage4.9;lineage6.3 | None |
ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
SRR20969708 | HR-TB | lineage2.2 | None |
ERR3797048 | Other | La3;lineage4.9 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
ERR3797063 | Sensitive | La3;lineage4.9 | None |
ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR13265748 | Other | lineage4.9;lineage6.3 | None |
ERR9117709 | Other | None | |
ERR736867 | Other | lineage2.1;lineage4.9 | None |
SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
SRR20970016 | Other | lineage2.2 | None |
SRR28119756 | Other | lineage4.9;lineage6.3 | None |
SRR1180226 | HR-TB | lineage4.9 | None |
ERR2693252 | Sensitive | lineage4.9 | None |
ERR13265528 | Other | lineage4.9;lineage6.3 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
SRR29096410 | Other | lineage4.9 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR3797029 | Other | lineage4.9 | None |
SRR1184388 | Other | lineage2.1;lineage4.9 | None |
ERR4188247 | HR-TB | lineage4.9 | None |
SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None |
ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
ERR3283031 | Sensitive | La3;lineage4.9 | None |
ERR4769474 | HR-TB | lineage4.9 | None |