Rv3795 - c.1962G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
7 Sensitive
1 RR-TB
18 HR-TB
4 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 10 |
| lineage4.1.1.1 | 1 |
| lineage4 | 2 |
| lineage4.9 | 19 |
| 18 | |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.2.1 | 15 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR2027263 | Other | lineage4 | None | SRR26159043 | Other | lineage4.9 | None | ERR4810741 | HR-TB | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3675236 | Other | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR29097037 | Other | lineage4.9 | None | ERR752033 | Sensitive | lineage2.2.1 | th | ERR752142 | Sensitive | lineage2.2.1 | th | ERR718212 | Sensitive | lineage2.2.1 | th | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184372 | MDR-TB | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6789626 | Other | None | ERR4811075 | Other | None | ERR4811142 | RR-TB | None | SRR28119753 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR702406 | Other | lineage2.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR751636 | Sensitive | lineage2.2.1 | th | ERR718457 | Sensitive | lineage2.2.1 | th | ERR751809 | Sensitive | lineage2.2.1 | th | SRR28119805 | Other | lineage4.9 | None | ERR4817060 | Other | None | ERR234659 | Other | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR1196768 | MDR-TB | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4811311 | Other | None | SRR29093909 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4817893 | Other | lineage4.8 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR718304 | Sensitive | lineage2.2.1 | th | SRR1184381 | MDR-TB | None | ERR751640 | Other | lineage2.2.1 | th | SRR25827682 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786671 | Other | None | ERR4819241 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None |
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