TB-Profiler
Home
Upload
SRA data
Rv1854c
- c.816C>T
Drug resistance types
2 Sensitive
0 RR-TB
9 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.1;lineage4.9
6
5
lineage2.1
4
lineage2.1;lineage4.9;lineage6.3
3
La3;lineage2.1;lineage4.9
3
La3;lineage4.9
3
lineage4.9
3
lineage2.2.1
2
lineage4.1.2.1
2
lineage4.4
1
Showing 1 to 10 of 29 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
51
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
ERR176793
Other
lineage4.1.1.1
None
ERR2027263
Other
lineage4
None
ERR234659
Other
None
ERR323043
Other
lineage2.1;lineage4.9
None
ERR4797054
Pre-XDR-TB
lineage2.1
None
ERR4800341
Other
lineage3
None
ERR4814352
Other
lineage2.2.1
None
Showing 1 to 10 of 51 entries
Previous
1
2
3
4
5
6
Next