Rv0006 - p.Arg789Gly
Drug resistance types
15 Sensitive
0 RR-TB
98 HR-TB
15 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| 91 | |
| lineage4.9 | 10 |
| lineage4 | 4 |
| lineage2.2.1 | 39 |
| lineage3.1 | 4 |
| lineage4.3.3 | 1 |
| lineage4.5 | 2 |
| lineage2 | 3 |
| lineage4.8;lineage3 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage3.1.1 | 1 |
| lineage1.1 | 1 |
| La2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.2 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR1640750 | HR-TB | None | SRR13861305 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR26399246 | Sensitive | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26937115 | MDR-TB | lineage2.2.1 | None | SRR25827313 | XDR-TB | lineage4.8;lineage3 | None | SRR26399910 | Sensitive | lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR22250142 | Sensitive | lineage2.2.1 | None | SRR3675482 | HR-TB | None | SRR26399526 | Other | lineage2.2.1 | None | SRR26399920 | Sensitive | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675236 | HR-TB | None | ERR4816999 | Other | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | SRR5073996 | Sensitive | lineage2.2.1 | vn | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | SRR5073612 | HR-TB | lineage2.2.1.1 | vn | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR5073931 | HR-TB | lineage2.2.1 | vn | SRR5073546 | Sensitive | lineage2.2.1 | vn | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5074188 | Sensitive | lineage2.2.1 | vn | SRR5073616 | Sensitive | lineage2.2.1 | vn | SRR5065353 | Sensitive | lineage2.2.1 | vn | SRR5065670 | HR-TB | lineage2.2.1 | vn | SRR5065314 | HR-TB | lineage2.2.1 | vn | SRR5067567 | Other | lineage2.2.1 | vn | SRR5067390 | HR-TB | lineage2.2.1 | vn | SRR5067241 | Sensitive | lineage2.2.1 | vn | SRR5067564 | Other | lineage2.2.1 | vn | SRR5067290 | Sensitive | lineage2.2.1 | vn | SRR5067275 | Sensitive | lineage2.2.1 | vn | ERR4819781 | Other | lineage2.2.1 | None | ERR7911122 | MDR-TB | lineage2.2.1 | vn | ERR2509673 | Other | lineage2.2.1 | None | SRR5007188 | Other | lineage4 | None | SRR5341302 | HR-TB | None | SRR6045952 | HR-TB | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496509 | Other | None | ERR323055 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797069 | Other | None | ERR3283051 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR5336148 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4188350 | HR-TB | None | ERR4831786 | HR-TB | lineage2.2.1 | vn | ERR4810741 | HR-TB | None | ERR4831751 | HR-TB | lineage2.2.1 | vn | ERR4830443 | Other | lineage2.2.1 | vn | ERR736867 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR7339130 | Sensitive | lineage2.2.1 | None | SRR21732842 | Sensitive | lineage2.2.1 | None | ERR736874 | HR-TB | None | SRR26937075 | HR-TB | lineage2.2.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR24083724 | Sensitive | lineage2.2.1 | None | ERR9786671 | Other | None | ERR8976043 | HR-TB | None | ERR9119417 | Other | lineage2.2.1 | None | ERR7737900 | MDR-TB | lineage2.2.1 | None | SRR21733084 | Other | lineage2.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR11050153 | HR-TB | lineage2.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1167384 | Other | lineage4 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169194 | Other | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None |
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