lineage | Count |
---|---|
lineage2.1;lineage4.9 | 7 |
lineage4.7 | 1 |
lineage2.1;lineage6.3 | 2 |
lineage2.1;lineage4.9;lineage6.3 | 4 |
8 | |
lineage2.2.1 | 3 |
lineage4.4.1.1 | 2 |
lineage4.1.2.1 | 2 |
lineage4.9;lineage6.3 | 3 |
lineage4.6.3;lineage4.9 | 1 |
lineage2.1 | 1 |
lineage4.9 | 8 |
La1.2.BCG;La1.8.1 | 1 |
lineage4 | 1 |
lineage4.1.3 | 2 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR7535086 | Other | None | SRR15316360 | MDR-TB | lineage2.2.1 | None | ERR4553599 | MDR-TB | lineage4.4.1.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR29017153 | MDR-TB | lineage4.4.1.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR7496517 | Other | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6789626 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR9787197 | Other | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR3675275 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | SRR3675214 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046066 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9117709 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None |
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