Rv0486 - c.573C>G
Drug resistance types
6 Sensitive
3 RR-TB
54 HR-TB
7 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| 21 | |
| lineage4.9 | 29 |
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1 | 7 |
| lineage2.1;lineage4.9 | 10 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| La3;lineage4 | 1 |
| lineage2.2.1.2 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 8 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.8 | 3 |
| La3;lineage4.9 | 7 |
| lineage4 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8.1 | 1 |
| La1.7;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786843 | Other | None | ERR2514692 | Other | None | ERR9787197 | Other | None | ERR234659 | Other | None | SRR10808730 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4800341 | Other | None | ERR4816999 | Other | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4810741 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | ERR6358991 | HR-TB | None | ERR4811142 | RR-TB | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR3283032 | Other | lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR3675549 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4820335 | Other | lineage4.1.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4811105 | HR-TB | None | SRR6789626 | Other | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4815752 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | ERR9117709 | Other | None | ERR4816656 | Other | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786671 | Other | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811075 | Other | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4811311 | Other | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | ERR3283044 | Other | lineage4 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4817893 | Other | lineage4.8 | None | ERR9117721 | HR-TB | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR7496509 | Other | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None |
|---|
