Rv2752c - c.-370A>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
72 Sensitive
3 RR-TB
16 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 80 |
| lineage4.9 | 23 |
| lineage2.1;lineage4.9 | 9 |
| 19 | |
| lineage2.2.1.1 | 3 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.4.1.1 | 1 |
| La3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.3 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 167 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3559511 | Sensitive | lineage2.2.1 | None | ERR3559539 | Sensitive | lineage2.2.1 | None | ERR3559553 | Sensitive | lineage2.2.1 | None | SRR1196566 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3559523 | Sensitive | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | ERR3559524 | Sensitive | lineage2.2.1 | None | ERR3559537 | Sensitive | lineage2.2.1.1 | None | ERR3559526 | Sensitive | lineage2.2.1 | None | ERR3559534 | Sensitive | lineage2.2.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3559508 | Sensitive | lineage2.2.1 | None | ERR4815604 | Other | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR3559546 | Sensitive | lineage2.2.1 | None | ERR3559528 | Sensitive | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR13837524 | Sensitive | lineage4.9 | None | ERR13267125 | Pre-XDR-TB | lineage2.2.1 | None | SRR13837894 | Sensitive | lineage4.9 | None | ERR3559548 | Sensitive | lineage2.2.1 | None | ERR1034698 | Other | lineage2.2.1 | in | ERR3559513 | Sensitive | lineage2.2.1 | None | ERR4553827 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4811142 | RR-TB | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4 | None | SRR21277205 | Sensitive | lineage2.2.1 | None | SRR15723264 | Sensitive | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3559555 | Sensitive | lineage2.2.1 | None | SRR13861153 | Other | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR21277090 | Sensitive | lineage2.2.1 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR21277029 | Sensitive | lineage2.2.1 | None | ERR4796966 | HR-TB | lineage2.2.1 | in | SRR13837525 | Sensitive | lineage4.9 | None | SRR29914426 | Pre-XDR-TB | lineage2.2.1 | None | ERR3559542 | Sensitive | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3559531 | Sensitive | lineage2.2.1.1 | None | ERR3559525 | Sensitive | lineage2.2.1 | None | SRR22249375 | Sensitive | lineage2.2.1 | None | SRR13837635 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2513083 | Sensitive | lineage2.2.1 | gb | SRR3675457 | Other | lineage4.9 | None | ERR3559510 | Sensitive | lineage2.2.1 | None | ERR3559552 | Sensitive | lineage2.2.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR3559549 | Sensitive | lineage2.2.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR21279461 | Sensitive | lineage2.2.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR15315831 | Sensitive | lineage2.2.1 | None | SRR13861685 | Other | lineage4.9 | None | SRR28409547 | Sensitive | lineage2.2.1 | None | SRR1196494 | MDR-TB | None | SRR6045526 | Other | lineage4.9 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035157 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3559544 | Sensitive | lineage2.2.1 | None | SRR29050859 | Other | lineage4.9 | None | ERR3559543 | Sensitive | lineage2.2.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR21277058 | Sensitive | lineage2.2.1 | None | ERR4819932 | Sensitive | lineage4.7 | None | ERR3559535 | Sensitive | lineage2.2.1 | None | SRR3675236 | Other | None | SRR7535086 | Other | None | SRR15316084 | Other | lineage2.2.1 | None | SRR13861467 | Sensitive | lineage4.9 | None | SRR27069376 | MDR-TB | lineage2.2.1 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR3561766 | Sensitive | lineage2.2.1 | None | SRR1172728 | RR-TB | La3 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR4423180 | Pre-XDR-TB | lineage2.2.1 | None | ERR3559538 | Sensitive | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR3559540 | Sensitive | lineage2.2.1 | None | SRR13837743 | Sensitive | lineage4.9 | None | ERR3559516 | Sensitive | lineage2.2.1 | None | ERR212001 | HR-TB | None | SRR27069377 | MDR-TB | lineage2.2.1 | None | ERR3559529 | Sensitive | lineage2.2.1 | None | SRR6152760 | Other | lineage2.2.1 | ca | SRR6280206 | Sensitive | lineage2.2.1 | cn | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR3559541 | Sensitive | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR25514949 | MDR-TB | lineage2.2.1 | None | ERR3559521 | Sensitive | lineage2.2.1 | None | SRR13837419 | Sensitive | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR3559514 | Sensitive | lineage2.2.1 | None | ERR3559522 | Sensitive | lineage2.2.1 | None | ERR3559545 | Sensitive | lineage2.2.1 | None | ERR3559551 | Sensitive | lineage2.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR21277834 | Sensitive | lineage2.2.1 | None | ERR13249812 | Sensitive | lineage4.5 | None | ERR4817735 | Other | lineage4.8 | None | ERR3559547 | Sensitive | lineage2.2.1 | None | SRR6789626 | Other | None | ERR2027263 | Other | lineage4 | None | ERR3559520 | Sensitive | lineage2.2.1 | None | SRR13837418 | Sensitive | lineage4.9 | None | ERR4816999 | Other | None | SRR29914423 | MDR-TB | lineage2.2.1 | None | ERR4811105 | HR-TB | None | ERR3559550 | Sensitive | lineage2.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR13861323 | Other | lineage4.9 | None | ERR3559533 | Sensitive | lineage2.2.1 | None | ERR3559527 | Sensitive | lineage2.2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR3559515 | Sensitive | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3559536 | Sensitive | lineage2.2.1 | None | SRR25207277 | Pre-XDR-TB | lineage2.2.1 | None | ERR3559557 | Sensitive | lineage2.2.1 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR3559530 | Sensitive | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR3559517 | Sensitive | lineage2.2.1 | None | ERR3559532 | Sensitive | lineage2.2.1 | None | ERR3559509 | Sensitive | lineage2.2.1 | None | ERR3559554 | Sensitive | lineage2.2.1.1 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | ERR2514692 | Other | None | ERR4817060 | Other | None | ERR234659 | Other | None | SRR10040454 | MDR-TB | lineage2.2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR3559519 | Sensitive | lineage2.2.1 | None | ERR3559512 | Sensitive | lineage2.2.1 | None | SRR6824513 | Sensitive | lineage2.2.1 | cn |
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