Rv0005 - c.900G>C
Drug resistance types
8 Sensitive
3 RR-TB
68 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| lineage4.9 | 9 |
| lineage2.2.1 | 6 |
| 78 | |
| lineage4.7 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4 | 16 |
| lineage2 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| La3 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| lineage2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage2.2 | 1 |
| lineage4.8 | 2 |
| lineage4.8;La3 | 1 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819546 | HR-TB | lineage3 | None | ERR4820185 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341333 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046540 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR502532 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | ERR1034634 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797069 | Other | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3994117 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | SRR1169194 | Other | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9117709 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR10808805 | Sensitive | None | SRR1172857 | MDR-TB | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173363 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675236 | HR-TB | None | ERR212033 | HR-TB | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818615 | Other | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None |
|---|
