Rv0006 - c.2364A>C


Drug resistance types
0 Sensitive 1 RR-TB 18 HR-TB 2 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 42 Other
lineage Counts
lineage Count
La3 1
lineage2.1 2
lineage4.9 10
5
lineage2.1;lineage4.9 9
lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
lineage4.9;lineage9 1
lineage4.3.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2.1 5
M.canetti;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.1.1.1 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
lineage2.2.1;lineage6.3 1
La3;lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1172817 Other La3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6044942 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR502912 Other lineage2.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184372 MDR-TB None
SRR21732980 Other lineage4.3.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
SRR1165699 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184381 MDR-TB None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR4819781 Other lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None