Rv0006 - c.2364A>C
Drug resistance types
1 Sensitive
1 RR-TB
16 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 9 |
| lineage4.9 | 12 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage4.9 | 2 |
| lineage2.2.1 | 7 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 2 |
| 10 | |
| lineage4.3.3 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.8 | 1 |
| La3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR212123 | Other | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184372 | MDR-TB | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR161037 | Other | lineage4.9 | None | ERR4811075 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR3675236 | Other | None | ERR4817893 | Other | lineage4.8 | None | SRR1172817 | Other | La3 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR3675572 | Other | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4816999 | Other | None | ERR4811105 | HR-TB | None | ERR4811142 | RR-TB | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None |
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