Rv3805c - c.658T>C
Drug resistance types
14 Sensitive
4 RR-TB
26 HR-TB
14 MDR-TB
2 Pre-XDR-TB
3 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1 | 19 |
| lineage4.3.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9 | 10 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| 17 | |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 24 |
| lineage2.2.1;lineage4.1.1.2 | 1 |
| La3;lineage4.9 | 1 |
| lineage4 | 2 |
| La3 | 2 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4.8 | 3 |
| lineage3.1.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.6.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1181384 | Sensitive | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2515300 | Sensitive | lineage2.2.1 | za | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11488915 | MDR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR6358991 | HR-TB | None | ERR4808959 | Sensitive | lineage2.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR29093909 | Other | lineage4.9 | None | ERR13260817 | Sensitive | lineage2.2.1;lineage4.1.1.2 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675549 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29603691 | Sensitive | lineage3 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | ERR4817060 | Other | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR2515439 | Sensitive | lineage2.2.1 | za | SRR3675572 | Other | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR1181330 | Sensitive | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR6896530 | Sensitive | lineage2.2.1 | None | SRR18213713 | HR-TB | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1180238 | Sensitive | lineage2.2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR15368973 | Other | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR4811075 | Other | None | ERR4810741 | HR-TB | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4819932 | Sensitive | lineage4.7 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR29051093 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR2514692 | Other | None | SRR25827682 | Other | None | ERR9787197 | Other | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR8975413 | HR-TB | lineage2.2.1 | None | SRR6855730 | Sensitive | lineage2.2.1 | None | ERR4818615 | Sensitive | None | SAMN02585943 | Sensitive | lineage2.2.1 | za | ERR3283042 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR6789626 | Other | None | SRR29051077 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR6358755 | Other | lineage4.6.1 | None | SRR28119753 | Other | lineage4.9 | None | ERR4811311 | Other | None | SRR3675248 | Other | lineage4.9 | None | SRR3675236 | Other | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1183012 | Sensitive | lineage2.2.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR11488404 | RR-TB | lineage2.2.1 | None | ERR11488332 | RR-TB | lineage2.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None |
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