Rv1854c - c.1260T>G
Drug resistance types
1 Sensitive
1 RR-TB
17 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.3 | 2 |
| lineage2.2.1 | 4 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.9 | 10 |
| lineage2.1 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| 8 | |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12416824 | HR-TB | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR9117709 | Other | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR212001 | HR-TB | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786604 | Other | None | SRR3675457 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675236 | Other | None | SRR7535086 | Other | None | ERR9787165 | Other | lineage6 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR234659 | Other | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
|---|
