Rv0001 - c.1041G>A


Drug resistance types
0 Sensitive 0 RR-TB 15 HR-TB 7 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 69 Other
lineage Counts
lineage Count
lineage2.2.1 4
lineage2.1;lineage6.3 2
La3;lineage4.8 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage2.1;lineage4.9;lineage6.3 5
La3;lineage2.1;lineage4.9 2
La1.7.X-unk4;lineage4.9 1
lineage4.8 2
lineage4.9;lineage6.3 3
lineage4.6.1.1 1
lineage2.1;lineage4.9 10
lineage4.1.3 2
lineage4.9 13
lineage4.1.2.1 5
lineage4.6.2.2 1
M.canetti;lineage4.9;lineage9 1
13
lineage1.1.2 1
lineage4.7 1
La3;lineage1.1.2 1
lineage4.3.4.2.1 1
lineage1.1;lineage4 1
La1.7;lineage4.9;lineage7 1
La1.2.BCG;La1.8.1 1
lineage4.4.1.1 1
lineage4.1.1.1 2
lineage4.3.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1 1
lineage3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
La1.2.BCG 1
La3;lineage4.9 1
lineage2.2.1;lineage3 1
lineage4 1
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 93
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798493 MDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9786604 Other None
ERR9117709 Other None
SRR25827682 Other None
SRR7496517 Other None
SRR3675236 Other None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4819932 Other lineage4.7 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786569 Other lineage4.8 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045555 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4797588 MDR-TB lineage3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR6046594 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR3675275 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046485 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR161037 HR-TB lineage4.9 None
SRR7496509 Other None
ERR9786671 Other None
ERR4407463 HR-TB None
ERR9787197 Other None