Rv0006 - c.552C>G


Drug resistance types
2 Sensitive 3 RR-TB 23 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 58 Other
lineage Counts
lineage Count
lineage4.9 13
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 3
lineage4.9;lineage7 2
lineage4.6.1.1 3
lineage2.1;lineage4.9 6
lineage4.1.2.1 2
La1.7.1;lineage4.9 1
M.canetti;lineage4.9 3
La3 2
La3;lineage4.9 5
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 8
lineage4.9;lineage6.3 7
6
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
lineage6.3.1 1
lineage4.7 1
lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage3 1
M.canetti;lineage2.1;lineage4.9 2
lineage5.2 2
lineage2.2.1 2
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
lineage2.1 2
lineage4.8.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 92
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR387051 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR1035157 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1172817 Other La3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR3675236 Other None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR4800341 Other lineage3 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR1063849 HR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
SRR7535086 Other None
SRR1172728 RR-TB La3 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None