Rv0676c - c.2490G>A


Drug resistance types
16 Sensitive 1 RR-TB 34 HR-TB 19 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 54 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 7
La3;M.canetti;lineage2.1;lineage4.9 10
La3;M.canetti;lineage4.8;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage4.9 21
lineage2.2 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage4.9 14
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La2;lineage4.9 1
M.canetti;lineage2.2 1
lineage4.5 2
La1.7;lineage3.1;lineage4 1
M.canetti;lineage2.1;lineage4.9 6
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.2.1.1 1
La3 1
lineage1.1.3.1 1
lineage4.4.1.2 1
lineage1.1.2 1
lineage2.1;lineage4.9 6
lineage3.1.2.1 1
La1.7;lineage4.9 1
lineage3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
6
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.4.2 1
lineage4.8 1
La1;lineage4.1.2 1
M.canetti;lineage2.1 1
lineage4.3.4.2.1 2
lineage2.2.1 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4 1
lineage4.1.2.1 1
lineage2.2.1;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage3.1 1
spoligotype Counts
spoligotype Count
None 127
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1165667 Other lineage4.9;lineage6.3 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR3283040 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR21722116 Other lineage4.5 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172234 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR11049020 Other lineage4.8 None
ERR176643 Other La3;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR13291680 Sensitive lineage4.5 None
ERR176751 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR1184381 MDR-TB None
SRR25827682 Other None
ERR212033 Other lineage4.9 None
ERR234659 Other None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283028 Other La3;lineage4 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
SRR3675236 Other None
SRR1165699 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4800341 Other lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR1184294 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR28119805 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None