Rv0001 - c.649C>T


Drug resistance types
15 Sensitive 3 RR-TB 17 HR-TB 6 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
lineage1.2.2.1 15
lineage2.1;lineage4.9;lineage6.3 9
lineage4.6.2.2 1
11
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 11
lineage4.9 13
La3;lineage1.1.2 1
lineage2.2.1 6
lineage4.9;lineage6.3 2
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.1 2
lineage4 1
lineage4.1.3 2
La3 2
lineage3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage2 1
spoligotype Counts
spoligotype Count
None 98
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR8975359 Sensitive lineage1.2.2.1 None
ERR11466522 Sensitive lineage1.2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR7821110 Sensitive lineage1.2.2.1 None
SRR1184381 MDR-TB None
ERR9117709 Other None
SRR3675236 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797069 Other lineage4.9 None
ERR11466523 Sensitive lineage1.2.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR2199940 Sensitive lineage1.2.2.1 sz
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR2660522 Sensitive lineage1.2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR7496472 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4797588 MDR-TB lineage3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675572 Other None
ERR9786604 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR11252659 Sensitive lineage1.2.2.1 None
SRR1196583 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR8975894 Sensitive lineage1.2.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR10315571 Sensitive lineage1.2.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR2199950 Sensitive lineage1.2.2.1 sz
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1196546 Other lineage4.9 None
SRR1172817 Other La3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
ERR9786671 Other None
ERR9787197 Other None
SRR1196768 MDR-TB None
ERR11252473 Sensitive lineage1.2.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR2199971 Sensitive lineage1.2.2.1 sz
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR7821116 Sensitive lineage1.2.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6896380 Sensitive lineage1.2.2.1 None
ERR2515878 Sensitive lineage1.2.2.1 za
ERR3283019 Other lineage2.1;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR6785267 Other lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None