Rv3805c - c.1575T>C
Drug resistance types
3 Sensitive
1 RR-TB
11 HR-TB
4 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| lineage2.1;lineage4.9 | 8 |
| lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage2.2.2 | 9 |
| 13 | |
| lineage4.9 | 7 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage2.2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage1.1.2 | 1 |
| lineage2.2.1.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.4.2 | 5 |
| lineage4.6.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21031694 | Sensitive | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1013551 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013552 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811075 | Other | None | ERR4811142 | RR-TB | None | SRR28119753 | Other | lineage4.9 | None | ERR4811311 | Other | None | SRR29093909 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR9117721 | HR-TB | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SAMN02360555 | Pre-XDR-TB | lineage2.2.2 | kr | SRR28119805 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR1048850 | Pre-XDR-TB | lineage2.2.2 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR29051077 | Other | lineage4.9 | None | ERR4811105 | HR-TB | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | SRR28119777 | Other | lineage4.9 | None | ERR9117709 | Other | None | SRR28119811 | Other | lineage2.2.1 | None | SRR25515016 | Sensitive | lineage2.2.1 | None | SRR28045878 | Sensitive | lineage1.1.2 | None | SRR25827682 | Other | None | ERR234659 | Other | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR13194007 | MDR-TB | lineage2.2.2 | None | ERR13194006 | MDR-TB | lineage2.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | DRR473915 | HR-TB | lineage2.2.2 | None | SRR29093099 | MDR-TB | lineage2.2.2 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | ERR4800341 | Other | None | ERR4810741 | HR-TB | None | ERR6358755 | Other | lineage4.6.1 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675236 | Other | None | SRR12416824 | HR-TB | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1048851 | Pre-XDR-TB | lineage2.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
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