Rv0006 - c.396C>A
Drug resistance types
5 Sensitive
0 RR-TB
11 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4 | 1 |
| lineage4.1.3 | 2 |
| lineage4.9 | 17 |
| lineage2.1;lineage6.3 | 2 |
| 8 | |
| lineage4.8.1 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.9;lineage6.3 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9;lineage9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3 | 1 |
| lineage2.2.1 | 3 |
| La3;lineage4.9 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4820854 | Other | lineage4.1.2.1 | None |
| ERR9117805 | Other | lineage4.3.2 | None |
| ERR3283044 | Other | lineage4 | None |
| ERR3804169 | HR-TB | lineage4.1.3 | None |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR9786611 | HR-TB | lineage4.1.3 | None |
| SRR3675549 | Other | lineage4.9 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| SRR7496509 | Other | None | |
| SRR12708389 | MDR-TB | lineage4.8.1 | None |
| SRR3675311 | Other | lineage4.9 | None |
| ERR4798262 | HR-TB | La1.2.BCG | None |
| ERR3797070 | Other | lineage4.9 | None |
| ERR4815752 | Other | lineage4.9 | None |
| SRR3675572 | Other | None | |
| SRR5341333 | Other | lineage2.1;lineage4.9 | None |
| SRR6045380 | Other | lineage2.1;lineage4.9 | None |
| SRR3675465 | Other | lineage4.9;lineage6.3 | None |
| ERR3283036 | Other | lineage2.1;lineage4.9 | None |
| ERR4818021 | Other | La1.2.BCG;La1.8.1 | None |
| SRR26399239 | Sensitive | lineage4.9 | None |
| SRR6046540 | Other | lineage2.1;lineage4.9 | None |
| SRR18213713 | HR-TB | None | |
| ERR3283019 | Other | lineage2.1;lineage4.9 | None |
| SRR19303884 | Other | lineage2.1;lineage6.3 | None |
| SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1169249 | Other | lineage4.9 | None |
| SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
| SRR6046521 | Other | lineage4.4.1.1 | None |
| SRR28409496 | Sensitive | lineage4.3.3 | None |
| ERR4816999 | Other | None | |
| SRR3675236 | Other | None | |
| SRR3675524 | Other | lineage4.9;lineage6.3 | None |
| ERR13285191 | Sensitive | lineage4.9 | None |
| ERR4800341 | Other | lineage3 | None |
| ERR9117709 | Other | None | |
| SRR3675581 | Other | lineage2.1;lineage4.9 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
| SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR7496472 | Other | lineage4.9 | None |
| SRR3675221 | Other | lineage4.9 | None |
| ERR4814352 | Other | lineage2.2.1 | None |
| SRR1180226 | HR-TB | lineage4.9 | None |
| ERR4819781 | Other | lineage2.2.1 | None |
| SRR1167384 | Other | La3;lineage4.9 | None |
| ERR13285192 | Sensitive | lineage4.9 | None |
| SRR6045242 | Other | lineage2.1;lineage4.9 | None |
| ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None |
| ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| SRR3675275 | Other | lineage4.9 | None |
| SRR3675214 | Other | lineage4.9 | None |
| ERR4817896 | HR-TB | lineage2.2.1 | None |
| ERR4819932 | Other | lineage4.7 | None |
| ERR9117721 | HR-TB | La3;lineage1.1.2 | None |
| SRR7496517 | Other | None | |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| SRR1165628 | Other | La3;lineage4.9 | None |
| ERR4816585 | Other | lineage2.2 | None |
| SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4815604 | Other | None | |
| SRR6046066 | Other | lineage4.9 | None |
| SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
