Rv0006 - c.396C>A
Drug resistance types
5 Sensitive
0 RR-TB
10 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage9 | 2 |
| lineage4.9 | 15 |
| lineage3 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.9 | 7 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage3.1.2.1;lineage4.9 | 1 |
| 8 | |
| lineage2.2.1 | 3 |
| lineage4.7 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.3.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.8.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4 | 1 |
| La3;lineage4.9 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4819932 | Other | lineage4.7 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4815604 | Other | None | ERR4816999 | Other | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9117709 | Other | None | SRR3675549 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4814352 | Other | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046066 | Other | lineage4.9 | None | SRR28409496 | Sensitive | lineage4.3.3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR3283044 | Other | lineage4 | None | SRR7496509 | Other | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR7496517 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046521 | Other | lineage4.4.1.1 | None |
|---|
