lineage | Count |
---|---|
lineage2.2.1 | 3 |
40 | |
lineage4.4.1 | 1 |
lineage4.3 | 1 |
lineage4 | 4 |
lineage4.1.2.1 | 1 |
La3 | 1 |
lineage4.9 | 4 |
lineage1.2.1.2.1 | 1 |
La1.3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819781 | Other | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR1750938 | Other | lineage4.4.1 | None | ERR176568 | Other | lineage4.3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4821413 | Other | La3 | None | SRR6046087 | Other | None | SRR6045466 | Sensitive | None | SRR6046540 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044911 | Sensitive | lineage4.9 | None | SRR6046066 | HR-TB | None | ERR502889 | Other | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | SRR7496517 | Other | None | ERR6336807 | HR-TB | lineage1.2.1.2.1 | None | SRR7535086 | Other | None | ERR3797069 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR4772222 | HR-TB | La1.3 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172728 | MDR-TB | None | ERR736867 | HR-TB | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1181050 | MDR-TB | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | ERR4815604 | HR-TB | None | SRR1196768 | MDR-TB | None |
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