Rv3805c - c.-296G>C
Drug resistance types
4 Sensitive
1 RR-TB
22 HR-TB
15 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| 13 | |
| lineage3 | 4 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9 | 8 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1 | 4 |
| lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 14 |
| M.canetti;lineage2.2 | 2 |
| La3;lineage4.9 | 2 |
| La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1640750 | Other | None | SRR29441099 | Sensitive | lineage3 | None | SRR12199464 | Sensitive | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR6789626 | Other | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR4797894 | Other | lineage3 | in | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR4811075 | Other | None | ERR4811142 | RR-TB | None | SRR28119753 | Other | lineage4.9 | None | ERR4811311 | Other | None | ERR990545 | Other | lineage3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR212001 | HR-TB | None | ERR9786604 | Other | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1169249 | Other | lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR8976043 | HR-TB | lineage2.2 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR13265124 | Sensitive | lineage3 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None |
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