lineage | Count |
---|---|
La2 | 1 |
39 | |
lineage4 | 9 |
lineage1.1.2 | 1 |
lineage3.1.2 | 1 |
lineage2.2 | 5 |
lineage4.1.2.1.1 | 1 |
lineage4.3 | 2 |
La3 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1 | 2 |
lineage4.9 | 2 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.4 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 69 |
ID | Drug resistance | Lineage | Country iso2 | ERR502524 | HR-TB | La2 | None | ERR323045 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR3445503 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283031 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR4800639 | HR-TB | lineage1.1.2 | None | ERR3797087 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736865 | HR-TB | None | ERR736835 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8975145 | Sensitive | lineage4.3 | None | SRR1169249 | Other | La3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | ERR176778 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | ERR11243544 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176779 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR181744 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176740 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR5341470 | HR-TB | None | ERR400549 | Sensitive | lineage3 | gb | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341330 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None |
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