Rv0010c - c.-318G>C
Drug resistance types
0 Sensitive
2 RR-TB
18 HR-TB
6 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| 15 | |
| lineage4.9 | 6 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.8 | 1 |
| lineage4.2.2.1 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR4817893 | Other | lineage4.8 | None | SRR1165699 | Other | lineage4.9 | None | ERR8773556 | MDR-TB | lineage4.2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | None | ERR4816585 | Other | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR7517714 | MDR-TB | lineage4.2.2.1 | ch | SRR1180137 | Other | lineage2.2.1 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4800341 | Other | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR8773558 | MDR-TB | lineage4.2.2.1 | None | ERR4811142 | RR-TB | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675236 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR25827682 | Other | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR18213713 | HR-TB | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
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