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SRA data
Rv1484
- c.555T>A
Drug resistance types
4 Sensitive
3 RR-TB
9 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
La1.7;lineage4.9;lineage7
3
M.canetti;lineage2.1;lineage4.9
2
lineage4.1;lineage4.8
2
lineage4.6.2.2
2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
M.canetti;lineage4.9;lineage9
1
1
lineage2.2.1
1
La1.7.X-unk4;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
31
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR161037
Other
lineage4.9
None
ERR181744
HR-TB
La3;lineage4.9
None
ERR1873393
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1873396
Pre-XDR-TB
M.canetti;lineage2.2
None
ERR212123
Other
lineage4.9
None
ERR2693229
RR-TB
La3;M.canetti;lineage4.9
None
ERR473314
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4811493
HR-TB
lineage4.9
None
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