Rv0006 - c.1542G>A


Drug resistance types
42 Sensitive 1 RR-TB 23 HR-TB 7 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 1
La1.7;lineage4.9;lineage7 1
lineage2.2.1 54
lineage4.9 29
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.9;lineage9 1
lineage2.2 1
lineage4.3.4.2 1
La1;lineage4.1.2 1
1
La1.7;lineage4.9 2
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.2 1
M.canetti;lineage1 1
lineage4.9;lineage9 1
La1;lineage4.9 1
lineage3 1
lineage4 1
lineage4.1;lineage4.8 1
M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 103
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR751696 HR-TB lineage2.2.1 th
ERR751819 Other lineage2.2.1 th
ERR718347 Sensitive lineage2.2.1 th
SRR11662623 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR11662611 MDR-TB lineage2.2.1 None
ERR751970 HR-TB lineage2.2.1 th
ERR752283 HR-TB lineage2.2.1 th
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1183049 RR-TB lineage2.2 None
ERR718245 HR-TB lineage2.2.1 th
ERR9786592 Other lineage4.3.4.2 None
ERR751736 Other lineage2.2.1 th
ERR323115 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR752173 Other lineage2.2.1 th
SRR10809074 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR751822 Sensitive lineage2.2.1 th
ERR718261 Other lineage2.2.1 th
ERR751675 HR-TB lineage2.2.1 th
ERR926159 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR718365 HR-TB lineage2.2.1 th
ERR751807 HR-TB lineage2.2.1 th
ERR926164 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR775799 Other lineage2.2.1 th
ERR718206 Sensitive lineage2.2.1 th
SRR29097066 Sensitive lineage4.9 None
ERR9786843 Other None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR751671 Other lineage2.2.1 th
ERR768051 Sensitive lineage2.2.1 th
ERR718208 Sensitive lineage2.2.1 th
ERR751786 HR-TB lineage2.2.1 th
ERR752279 Other lineage2.2.1 th
ERR767994 Other lineage2.2.1 th
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR11662274 HR-TB lineage2.2.1 None
ERR718563 HR-TB lineage2.2.1 th
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR751799 Sensitive lineage2.2.1 th
ERR12328177 HR-TB lineage2.2.1 None
ERR751791 Sensitive lineage2.2.1 th
ERR6358979 Other lineage4.9 None
SRR11662142 Pre-XDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR15316205 MDR-TB lineage2.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR718218 Other lineage2.2.1 th
ERR1063883 HR-TB lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR926158 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR10808805 Other La1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR990545 Other lineage3 None
ERR971389 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
SRR5709958 Sensitive lineage2.2.1 th
SRR25515702 Sensitive lineage2.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR718414 HR-TB lineage2.2.1 th
ERR736831 Other lineage4.9 None
ERR752152 Sensitive lineage2.2.1 th
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR3724964 Sensitive lineage2.2.1 None
ERR11081176 Sensitive lineage2.2.1 None
ERR751781 Other lineage2.2.1 th
ERR926155 Sensitive lineage4.9 None
ERR752224 Sensitive lineage2.2.1 th
SRR11662419 MDR-TB lineage2.2.1 None
ERR846993 Sensitive lineage2.2.1 th
ERR775753 HR-TB lineage2.2.1 th
SRR25207139 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR10828635 HR-TB lineage2.2.1 None
ERR751728 Sensitive lineage2.2.1 th
ERR752050 Sensitive lineage2.2.1 th
SRR5709765 Pre-XDR-TB lineage2.2.1 th
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR10828196 Pre-XDR-TB lineage2.2.1 None
SRR25515244 Sensitive lineage2.2.1 None
ERR751810 Sensitive lineage2.2.1 th
ERR485006 HR-TB lineage4.9 None
SRR25534194 Sensitive lineage2.2.1 None
ERR752259 Sensitive lineage2.2.1 th
SRR11662435 MDR-TB lineage2.2.1 None
ERR4596910 Sensitive lineage4.9 None