Rv0006 - c.1542G>A
Drug resistance types
29 Sensitive
5 RR-TB
27 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 54 |
| 1 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.9 | 28 |
| La1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| lineage2.2 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR718414 | HR-TB | lineage2.2.1 | th | SRR11662623 | MDR-TB | lineage2.2.1 | None | ERR9786843 | Other | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR11662419 | MDR-TB | lineage2.2.1 | None | ERR751822 | Sensitive | lineage2.2.1 | th | ERR752279 | Other | lineage2.2.1 | th | SRR11662611 | MDR-TB | lineage2.2.1 | None | ERR775753 | HR-TB | lineage2.2.1 | th | SRR25207139 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR752173 | Other | lineage2.2.1 | th | ERR1063883 | HR-TB | lineage4.9 | None | ERR751728 | Sensitive | lineage2.2.1 | th | ERR926160 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR751810 | Sensitive | lineage2.2.1 | th | ERR485006 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR11662435 | MDR-TB | lineage2.2.1 | None | ERR767994 | Other | lineage2.2.1 | th | ERR751970 | HR-TB | lineage2.2.1 | th | ERR473332 | Other | lineage4.9 | None | ERR752152 | Sensitive | lineage2.2.1 | th | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR751696 | HR-TB | lineage2.2.1 | th | ERR768051 | Sensitive | lineage2.2.1 | th | SRR11662274 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR971389 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR751799 | Sensitive | lineage2.2.1 | th | ERR752283 | HR-TB | lineage2.2.1 | th | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR926165 | Other | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR12328177 | HR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR751736 | Other | lineage2.2.1 | th | ERR323115 | Sensitive | lineage4.9 | None | SRR10828196 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515244 | Sensitive | lineage2.2.1 | None | ERR751671 | Other | lineage2.2.1 | th | ERR751786 | HR-TB | lineage2.2.1 | th | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR718261 | Other | lineage2.2.1 | th | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR751675 | HR-TB | lineage2.2.1 | th | ERR752259 | Sensitive | lineage2.2.1 | th | ERR323037 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR751807 | HR-TB | lineage2.2.1 | th | ERR718245 | HR-TB | lineage2.2.1 | th | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR751819 | Other | lineage2.2.1 | th | ERR751781 | Other | lineage2.2.1 | th | ERR4796929 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR11081176 | Sensitive | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR846993 | Sensitive | lineage2.2.1 | th | SRR1183049 | RR-TB | lineage2.2 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | SRR10828635 | HR-TB | lineage2.2.1 | None | SRR15316205 | MDR-TB | lineage2.2.1 | None | SRR5709765 | Pre-XDR-TB | lineage2.2.1 | th | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR718218 | Other | lineage2.2.1 | th | ERR926158 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR25534194 | Sensitive | lineage2.2.1 | None | ERR926163 | Other | lineage4.9 | None | ERR718365 | HR-TB | lineage2.2.1 | th | ERR718208 | Sensitive | lineage2.2.1 | th | ERR323107 | HR-TB | lineage4.9 | None | ERR751791 | Sensitive | lineage2.2.1 | th | SRR3724964 | Sensitive | lineage2.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR752224 | Sensitive | lineage2.2.1 | th | ERR718563 | HR-TB | lineage2.2.1 | th | ERR775799 | Other | lineage2.2.1 | th | ERR718206 | Sensitive | lineage2.2.1 | th | SRR5709958 | Sensitive | lineage2.2.1 | th | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR752050 | Sensitive | lineage2.2.1 | th | SRR25515702 | Sensitive | lineage2.2.1 | None | ERR926155 | Other | lineage4.9 | None | SRR11662142 | Pre-XDR-TB | lineage2.2.1 | None | ERR718347 | Sensitive | lineage2.2.1 | th |
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