Rv0565c - p.Ser311Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
31 HR-TB
16 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 11 |
| lineage4.9 | 7 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.9 | 5 |
| lineage2.2.1 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 7 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.2.1.2 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| 12 | |
| lineage4.1.1.3 | 1 |
| lineage3 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage2.1 | 2 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4821053 | Other | lineage3 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR4811142 | RR-TB | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786843 | Other | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR25827682 | Other | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4800341 | Other | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675236 | Other | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR9117709 | Other | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None |
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