Rv0001 - c.597C>G
Drug resistance types
5 Sensitive
1 RR-TB
12 HR-TB
3 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 6 |
| lineage2.2.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.9 | 12 |
| lineage4 | 2 |
| lineage4.6.2.2 | 2 |
| 7 | |
| lineage4.9;lineage6.3 | 2 |
| lineage3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 2 |
| lineage2.2 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage2.2 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4800341 | Other | lineage3 | None | ERR9117709 | Other | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR18213713 | HR-TB | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR117692 | Sensitive | lineage4.5 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6789626 | Other | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675572 | Other | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR2100254 | Sensitive | lineage4.5 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR9786843 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None |
|---|
