Rv3805c - c.393C>G
Drug resistance types
1 Sensitive
1 RR-TB
22 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 9 |
| lineage4.5 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| 1 | |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4811624 | Sensitive | lineage4.5 | cn | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR234659 | Other | None | ERR3283042 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
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