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SRA data
Rv0001
- c.1425C>T
Drug resistance types
2 Sensitive
0 RR-TB
3 HR-TB
0 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.2
2
lineage1.1.2
2
lineage2.2.1
2
M.canetti;lineage2.2.2;lineage6.2
2
lineage2.1;lineage4.9;lineage6.3
1
lineage4.9;lineage9
1
Showing 1 to 6 of 6 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
10
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13262178
Sensitive
lineage1.1.2
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR4831545
XDR-TB
M.canetti;lineage2.2
None
ERR4831546
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR7821163
Other
lineage2.2.1
None
ERR7911670
XDR-TB
M.canetti;lineage2.2
None
SRR1180137
Other
lineage2.2.1
None
SRR22424841
Sensitive
lineage1.1.2
None
SRR23961558
Other
lineage2.1;lineage4.9;lineage6.3
None
SRR6046720
HR-TB
lineage4.9;lineage9
None
Showing 1 to 10 of 10 entries
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