Rv0668 - c.3609C>G
Drug resistance types
4 Sensitive
6 RR-TB
55 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| 44 | |
| lineage4.1.2.1 | 11 |
| lineage4.9 | 20 |
| lineage2.2.1 | 7 |
| lineage3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 1 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| lineage4.1.1.3 | 2 |
| La1 | 1 |
| La1.8.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3.3 | 3 |
| lineage2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341330 | HR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2446563 | Other | lineage2.2.1 | nl | ERR278594 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | SRR6325442 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR11465665 | Other | lineage4.1.1.3 | None | ERR294266 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR323063 | HR-TB | None | ERR11489020 | MDR-TB | lineage2.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283025 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4769452 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4188350 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4769450 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6358837 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837697 | HR-TB | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861596 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR14782405 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR1640750 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4813861 | Other | lineage4.3.3 | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675383 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | SRR3675510 | Other | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | SRR3675545 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR3275196 | Other | lineage2.2.1 | nl |
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