EBG00000313339 - n.3060C>T
Drug resistance types
0 Sensitive
0 RR-TB
5 HR-TB
4 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 1 |
| lineage2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 4 |
| 2 | |
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage3 | 3 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR2446566 | Other | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6045526 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4800341 | Other | lineage3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR234659 | Other | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675248 | Other | lineage4.9 | None |
|---|
