TB-Profiler
Home
Upload
SRA data
Rv3696c
- c.514T>C
Drug resistance types
2 Sensitive
2 RR-TB
22 HR-TB
0 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
20 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
16
La1.7;lineage4.9
4
lineage2.2.1
3
M.canetti;lineage2.2.2;lineage6.2
2
lineage2.2.1.1
2
M.canetti;lineage2.2
2
La1.7;M.canetti;lineage4.9
2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
1
lineage4.3.2.1
1
lineage4.1;lineage4.8
1
Showing 1 to 10 of 24 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
48
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063849
HR-TB
lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR11252612
Other
La3;lineage4.9
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR212121
HR-TB
lineage4.9;lineage6.3
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4815441
HR-TB
lineage4.9
None
Showing 1 to 10 of 48 entries
Previous
1
2
3
4
5
Next