Rv0001 - c.1441C>T


Drug resistance types
1 Sensitive 7 RR-TB 21 HR-TB 26 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 19 Other
lineage Counts
lineage Count
lineage4.9 18
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La2;lineage4.9;lineage9 1
La2;lineage4.9 1
M.canetti;lineage4.9 3
La3;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2.2 1
lineage1.2.2.1 2
lineage4.9;lineage9 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.2.1.1 2
lineage2.2.1 3
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage4.2 1
La1.7;M.canetti;lineage4.9 1
La3;lineage2.1;lineage4.9 1
lineage4.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR212033 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR2514692 Other None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4818929 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR552562 Other lineage1.2.2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1169306 Other La3;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR552563 Other lineage1.2.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR987722 MDR-TB None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR21279429 Sensitive lineage4.2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR176751 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4816656 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046594 Other lineage4.9 None