lineage | Count |
---|---|
30 | |
lineage2.2.1 | 4 |
lineage4 | 5 |
lineage4.6.2.2 | 2 |
lineage2.2 | 3 |
lineage4.9 | 3 |
La1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage3 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 | ERR1035162 | Other | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514692 | Other | None | SRR6045503 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341456 | Other | None | SRR6045526 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1034634 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1034652 | Other | None | ERR3283025 | HR-TB | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3439432 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119669 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR1181020 | Other | lineage2.2.1 | None | ERR990545 | Other | lineage3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR3675550 | Other | None | SRR3675574 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None |
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