lineage | Count |
---|---|
57 | |
lineage4 | 19 |
lineage4.3.3 | 1 |
lineage4.9 | 1 |
lineage2.2.1 | 6 |
lineage2.2 | 2 |
lineage3.1 | 1 |
lineage2 | 3 |
lineage4.8 | 4 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.2.1.1 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 99 |
ID | Drug resistance | Lineage | Country iso2 | ERR6866022 | Other | None | ERR6359045 | HR-TB | None | SRR1173118 | Other | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR9786843 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1173400 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | ERR1949990 | Sensitive | lineage4.8 | None | SRR12142341 | HR-TB | None | SRR14782405 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675246 | Sensitive | lineage4 | None | SRR1196768 | MDR-TB | None | ERR1950012 | Sensitive | lineage4.8 | None | ERR212001 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR2228794 | Sensitive | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR234659 | HR-TB | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR6045555 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046133 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6785324 | MDR-TB | lineage2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045233 | HR-TB | None | SRR6485165 | MDR-TB | lineage4.2.1.1 | None | SRR6511621 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR1034634 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4024991 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None |
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