Rv1221 - c.624T>C


Drug resistance types
2 Sensitive 4 RR-TB 32 HR-TB 7 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 44 Other
lineage Counts
lineage Count
lineage4.9 14
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.9 3
lineage2.2.1 5
lineage2.1;lineage2.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 6
lineage4.9;lineage6.3 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
lineage2.2.1.2;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9.1 2
La3;lineage4.9 2
lineage2.1 3
M.canetti;lineage4.9 2
lineage2.2 1
lineage2.2.1;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
lineage2.1;lineage4.9 5
lineage2.2.1.1 2
6
La1.7.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 2
La1.7;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 90
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4816466 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4816585 Other lineage2.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28119777 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR29017081 Sensitive lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28351584 HR-TB lineage2.2.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR25827682 Other None
SRR1172857 Other None
SRR12142341 HR-TB lineage2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797048 Other La3;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119753 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
SRR7535086 Other None