TB-Profiler
Home
Upload
SRA data
Rv3696c
- c.495C>G
Drug resistance types
0 Sensitive
3 RR-TB
6 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
2
lineage4.1.2
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
lineage2.2.1.1
2
M.canetti;lineage2.1;lineage6.3
1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
lineage2.1;lineage2.2;lineage6.3
1
La2;lineage4.9
1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
1
Showing 1 to 10 of 13 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
17
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR323039
HR-TB
La2;lineage4.9
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
ERR8976043
HR-TB
lineage2.1;lineage2.2;lineage6.3
None
ERR987722
MDR-TB
None
SRR1180147
Other
lineage2.2.1.1
None
SRR1180172
Other
lineage2.2.1
None
SRR1183106
RR-TB
lineage2.2.1.1
None
SRR1183144
Other
lineage2.2.1
None
SRR29273723
RR-TB
lineage4.1.2
None
SRR29273869
RR-TB
lineage4.1.2
None
Showing 1 to 10 of 17 entries
Previous
1
2
Next