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SRA data
Rv0006
- c.-653T>G
Drug resistance types
3 Sensitive
2 RR-TB
12 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
9
lineage4.2;lineage4.9
2
lineage4.2;lineage4.8.1;lineage4.9
2
lineage2.2.1
2
M.canetti;lineage4.9;lineage9
1
La3;lineage4.3.4
1
M.canetti;lineage1
1
lineage4.9;lineage9
1
lineage4.4.1.2
1
La3;lineage4.9
1
Showing 1 to 10 of 14 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
25
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR161039
HR-TB
La3;lineage4.3.4
None
ERR181744
HR-TB
La3;lineage4.9
None
ERR181824
HR-TB
lineage4.9
None
ERR294266
HR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
ERR323056
HR-TB
lineage4.4.1.2
None
ERR4769474
HR-TB
lineage4.9
None
Showing 1 to 10 of 25 entries
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