lineage | Count |
---|---|
lineage4.9 | 29 |
lineage4.6.1.2 | 2 |
lineage4.8 | 6 |
lineage2.2.1 | 7 |
lineage4.9;lineage7 | 1 |
lineage3.1.2.1 | 1 |
La1.2.BCG | 2 |
lineage2.2.1.1 | 2 |
lineage4.9;lineage6.1.3 | 1 |
1 | |
lineage2.2.1.2 | 1 |
lineage2.2;lineage4.9 | 1 |
La1.2.BCG;lineage4.9 | 1 |
lineage4.9.1 | 1 |
La2;lineage2.2 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage1.1.2 | 1 |
La2;lineage4.9 | 1 |
lineage3 | 3 |
La1.7.X-unk4 | 1 |
lineage6.1.2 | 1 |
La1;lineage4.9 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage4.1.2.1 | 2 |
spoligotype | Count |
---|---|
None | 69 |
ID | Drug resistance | Lineage | Country iso2 | ERR926160 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR29096399 | Sensitive | lineage2.2.1 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR926157 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR22251268 | Sensitive | lineage1.1.2 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR736848 | Other | lineage4.9 | None |
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