lineage | Count |
---|---|
lineage4.9 | 10 |
13 | |
La1.7.X-unk4 | 1 |
La1.8.1 | 2 |
lineage4 | 3 |
lineage4.1.2.1 | 2 |
lineage4.3 | 1 |
lineage4.9;La1.3 | 1 |
La1.3 | 1 |
La1.2 | 1 |
lineage2.2.1.2 | 1 |
lineage3.1.2.1 | 1 |
lineage2.2.1 | 6 |
lineage1.1.2 | 1 |
lineage4.6.1.2 | 4 |
lineage4.8 | 2 |
lineage6 | 1 |
lineage2.2.1.1 | 3 |
lineage3 | 3 |
lineage4.1 | 1 |
lineage4.9.1 | 1 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4383948 | Other | lineage4.3 | None | ERR4188247 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR736848 | HR-TB | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR22251268 | Sensitive | lineage1.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787030 | Sensitive | lineage6 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR4815310 | Other | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SAMEA3501073 | RR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | Other | None | SRR5341456 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None |
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